江永普通野生稻遗传多样性和籼粳基因频率监测分析

以栽培稻的8个籼-粳测验种为对照,采用39对SSR引物检测了江永野生稻居群在1982年、2008年、2017年的遗传多样性,采用38对In Del引物检测了江永野生稻居群在1982年、2008年、2017年的籼-粳基因频率。结果表明:在1982年取样保存在异位圃的40份样本的遗传多样性稍高于2008年、2017年原位保护区样本的遗传多样性;2008年取的样本数虽然比2017年多,但两次取的样本之间遗传多样性几乎没差异。不同年份取的样本之间的遗传分化系数Fst都很小,基因流Nm都较大,分化不明显。通过聚类分析和主坐标分析(PCo A),发现野生稻居群与4份栽培粳稻聚为一类,4份栽培籼稻单独聚成一类,显示江永野生稻与粳稻的血缘近于籼稻;籼-粳基因频率的分析表明,野生稻样本多属粳稻型,少数属偏粳稻型,原位保护区的偏粳稻类型单株数占取样单株总数的比例,2008年比1982年的增加了10.0%,2017年比2008年的增加了1.6%,显示江永野生稻原位保护区生境条件有利野生稻从粳稻型向偏粳稻型变异,随着野生稻产生环境适应性变异,籼型基因频率在提高。     

Occurrence and molecular identification of the zoysiagrass mite Aceria zoysiae (Acari: Eriophyidae) in turfgrasses in Korea

Mites are one of the serious pests of turfgrass. Our survey of turfgrass fields from 2013 to 2015 in Korea showed that the occurrence of leaf chlorotic symptom has gradually extended to at least 60% of the examined golf courses. We identified the zoysiae mite Aceria zoysiae in most damaged zoysiagrasses. Artificial infestation of A. zoysiae into zoysiagrasses in pots resulted in symptoms of chlorosis and marginal rolling of the leaves within 3 weeks. We firstly determined the nucleotide sequence of mitochondrial cytochrome c oxidase subunit I (COI) and internal transcribed spacer 2 (ITS2) of the nuclear ribosomal DNA region of A. zoysiae. The variations in COI and ITS2 between A. zoysiae and other species of the genus were 20.9%–43.0% and 7.5%–67.3%, respectively, suggesting significant genetic divergence within the genus. Our study provides valuable information for the rapid diagnosis and infestation monitoring of A. zoysiae in turfgrass fields.     

Biocompatibility evaluation of bioprinted decellularized collagen sheet implanted in vivo cornea using swept‐source optical coherence tomography

Corneal transplantation by full‐thickness penetrating keratoplasty with human donor tissue is a widely accepted treatment for damaged or diseased corneas. Although corneal transplantation has a high success rate, a shortage of high‐quality donor tissue is a considerable limitation. Therefore, bioengineered corneas could be an effective solution for this limitation, and a decellularized extracellular matrix comprises a promising scaffold for their fabrication. In this study, three‐dimensional bioprinted decellularized collagen sheets were implanted into the stromal layer of the cornea of five rabbits. We performed in vivo noninvasive monitoring of the rabbit corneas using swept‐source optical coherence tomography (OCT) after implanting the collagen sheets. Anterior segment OCT images and averaged amplitude‐scans were acquired biweekly to monitor corneal thickness after implantation for 1 month. The averaged cornea thickness in the control images was 430.3 ± 5.9 μm, while the averaged thickness after corneal implantation was 598.5 ± 11.8 μm and 564.5 ± 12.5 μm at 2 and 4 weeks, respectively. The corneal thickness reduction of 34 μm confirmed the biocompatibility through the image analysis of the depth‐intensity profile base. Moreover, hematoxylin and eosin staining supported the biocompatibility evaluation of the bioprinted decellularized collagen sheet implantation. Hence, the developed bioprinted decellularized collagen sheets could become an alternative solution to human corneal donor tissue, and the proposed image analysis procedure could be beneficial to confirm the success of the surgery.      

基于红外相机的四川亚丁国家级自然保护区鸟兽多样性初报

2017年5～11月,我们在四川亚丁国家级自然保护区内共布设64台红外相机,对保护区内的兽类和鸟类多样性进行了调查。经过8 394个相机工作日的调查,我们共鉴定出分属9目26科共56种的野生兽类和鸟类,其中国家Ⅰ级、Ⅱ级重点保护野生动物分别有5种和13种,被IUCN红色名录评估为濒危(EN)、易危(VU)、近危(NT)的野生动物分别有2种、3种和6种。相对多度指数居前三位的兽类和鸟类分别是毛冠鹿(Elaphodus cephalophus)、珀氏长吻松鼠(Dremomys pernyi)、猕猴(Macaca mulatta)和血雉(Ithaginis cruentus)、大噪鹛(Garrulax maximus)、雉鹑(Tetraophasis obscurus)。本次调查初步了解了亚丁保护区内鸟兽的种类、丰富度、分布以及人为干扰情况,是亚丁国家级自然保护区第一次开展鸟兽的本底资源调查和研究。我们的调查结果对掌握亚丁国家级自然保护区的鸟兽种类和分布现状等本底资料具有重要意义,同时也为保护区今后的科研工作及开展野生动物的保护管理和长期监测提供了数据支持和指导。     

基于多源遥感数据的植物物种分类与识别: 研究进展与展望

物种分类与识别是生物多样性监测的基础, 明确物种的类别及其分布是解决几乎所有生态学问题的前提。为深入了解基于多源遥感数据的植物物种分类与识别相关研究的发展现状和存在的问题, 本文对2000年以来该领域的研究进行了总结分析, 发现: 当前大多数研究集中在欧洲和北美地区的温带或北方森林以及南非的热带稀树草原; 使用最多的遥感数据是机载高光谱数据, 而激光雷达作为补充数据, 通过单木分割及提供单木的三维垂直结构信息, 显著提高了分类精度; 支持向量机和随机森林作为应用最广的非参数分类算法, 平均分类精度达80%; 随着计算机技术及机器学习领域的不断成熟, 人工神经网络在物种识别领域得以迅速发展。基于此, 本文对目前基于遥感数据的植物物种分类与识别中在分类对象复杂性、多源遥感数据整合、植物物候与纹理特征整合和分类算法技术等方面面临的挑战进行了总结, 并建议通过整合多时相监测数据、高光谱和激光雷达数据、短波红外等特定波谱信息、采用深度学习等方法来提高分类精度。     

利用红外相机公里网格调查钱江源国家公园的兽类及鸟类多样性

2014年5月至2019年4月, 作者采用红外相机技术调查了浙江省钱江源国家公园的兽类及鸟类多样性。将整个国家公园划分为267个1 km × 1 km的调查网格, 每个网格内设置3个固定调查位点, 使用1台红外相机定期在同一网格内的位点之间进行轮换。其中, 古田山片区在5年内共完成14轮次调查, 古田山以外的区域自2018年7月纳入调查范围, 何田、长虹片区完成2次轮换, 齐溪片区完成1次轮换。在253个网格内的741个有效位点上共获得140,413个相机工作日的数据, 采集兽类和鸟类的照片和视频268,833份, 有效探测数74,368次, 鉴定出21种野生兽类, 72种野生鸟类, 5种家畜及家禽。包括国家一级重点保护野生动物2种, 即黑麂(Muntiacus crinifrons)、白颈长尾雉(Syrmaticus ellioti); 国家二级重点保护野生动物17种, 合计占野生物种总数的20.4%。被IUCN物种红色名录评估为易危(VU)的5种, 近危(NT)的4种, 合计占物种总数的9.7%。被中国脊椎动物红色名录评估为濒危(EN)的1种, 易危(VU)的9种, 近危(NT)的10种, 合计占物种总数的21.5%。相对多度指数最高的大中型兽类为小麂(Muntiacus reevesi), 鸟类为白鹇(Lophura nycthemera)。本次调查获得了国家公园内兽类和鸟类的多样性组成、空间分布和相对多度, 为长期科研监测和科学管理提供了基础数据。     

Baseline susceptibility of Asian corn borer (Ostrinia furnacalis (Guenée)) populations in Vietnam to Cry1Ab insecticidal protein

Susceptibility of Asian corn borer (ACB), Ostrinia furnacalis (Guenée) to Bacillus thuringiensis (Bt) Cry1Ab protein was studied between 2015 and 2016 with 11 ACB populations, collected from various geographical regions in Vietnam. A concentration range of Cry1Ab from 0.20 to 26.10 ng/cm² of diet was evaluated against F₁ ACB neonates using diet surface-overlay bioassays. Mortality data was recorded daily until seven days after infestation. Growth inhibition was recorded at the end of seven days. The median lethal concentration (LC₅₀) varied ≈3-fold among the different populations, ranging from 0.58 to 1.83 ng/cm² of diet with an overall mean of 0.86 ng/cm² of diet. Even the lowest concentration of 0.20 ng/cm² caused 73.53% growth inhibition. >90% growth inhibition was achieved at 0.82 ng/cm² or higher concentrations. The results reflect natural variation in Bt susceptibility among ACB populations rather than variation caused by prior exposure to selection pressures. LC₉₉ value (17.26 ng/cm²) was generated by pooling mortality data across different populations. The upper fiducial limit of LC₉₉ (24.38 ng/cm²) could be a potential diagnostic dose for future resistance monitoring programs. The findings from this study suggest that ACB populations in Vietnam are highly susceptible to Cry1Ab protein. This is the first report of Cry1Ab susceptibility of different ACB populations in Vietnam and will serve as a baseline for future resistance monitoring work.     

Evaluating outcomes of restoration ecology projects on limited budgets: assessment of variation in sampling intensity and sampling frequency for four habitat types

While best practices for evaluating restoration ecology projects are emerging rapidly, budget constraints often limit postrestoration monitoring, which emphasizes the need for practical and efficient monitoring strategies. We examined the postrestoration outcome for an ENGO (Nature Conservancy of Canada) project, to assess retroactively how variation in intensity and frequency of sampling would have affected estimates of plant species composition, diversity, and richness over time. The project restored four habitat types (mesic forest, oak woodland, wet meadow, and sand barren) using sculptured seeding of tallgrass prairie and woody species. Species‐level plant cover was monitored annually for 10 years in 168 2 × 2–m quadrats. We performed randomization tests to examine estimates of species diversity and richness as a function of the number of quadrats sampled, and assessed the necessity of annual sampling for describing changes in species composition and successional trajectories. The randomization tests revealed that sampling 10–17 quadrats, depending on habitat type, was sufficient to obtain estimates of species diversity that were at least 95% of values obtained from the whole dataset. Species richness as a function of number of quadrats sampled did not plateau, which suggests that rather than increasing the number of sampling quadrats, richness could be estimated more efficiently using nonquadrat based sampling techniques. Nonmetric multidimensional scaling analysis revealed that plant species composition largely stabilized by 3–5 years postrestoration depending on habitat type. By that time, native, seeded species dominated the restoration, and the benefits of annual sampling for tracking changes in species composition diminished.